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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7297: 15665 - Hypothetical Protein, at 1328512 to 1329745
15665
mRNA_7298: 15666 - Hypothetical Protein, at 1330125 to 1331364
15666
mRNA_7299: 15667 - KOG1721 FOG Zn-finger, at 1332620 to 1333113
15667
mRNA_7300: 15668 - SUPERFAMILY--SSF47823, at 1335856 to 1345801
15668
mRNA_7301: 15669 - Hypothetical Protein, at 1346160 to 1348267
15669
Group
Condition
mRNA_7297
mRNA_7298
mRNA_7299
mRNA_7300
mRNA_7301
15665
15666
15667
15668
15669
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.2
-0.9
-0.2
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
-0.5
-0.0
-0.6
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.0
-0.5
-0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.2
0.0
-0.2
-0.1
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.0
-0.0
0.1
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
0.1
-0.3
0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.4
-0.2
-0.2
0.1
-0.2
growth on ypd
YPD
-0.1
0.5
-0.2
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.0
-0.2
0.0
0.1
growth on oleic acid
YNB Glucose
0.1
0.1
0.1
0.1
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.3
0.1
0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.1
0.0
0.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.6
0.0
-0.0
0.1
-0.4
auxotrophy
Dropout Complete
0.4
-0.2
0.0
0.1
0.1
growth on ricinoleic acid
YNB Glucose
0.4
0.2
-0.1
0.0
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.0
0.4
0.1
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.3
0.0
0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.2
0.4
0.2
0.1
auxotrophy
YNB Glucose
0.3
0.1
0.0
0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.3
0.6
0.2
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.9
-0.2
0.0
0.2
0.1
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