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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7285: 15653 - HMMPfam-GPR1/FUN34/yaaH family-PF01184,ProSitePatterns-GPR1/FUN34/yaaH family signature.-PS01114, at 1296567 to 1298156
15653
mRNA_7286: 15654 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 1298455 to 1300194
15654
mRNA_7287: 15655 - KOG1650 Predicted K+/H+-antiporter, at 1300523 to 1304371
15655
mRNA_7288: 15656 - Hypothetical Protein, at 1304833 to 1305984
15656
mRNA_7289: 15657 - K12877 MAGOH protein mago nashi, at 1306449 to 1307582
15657
Group
Condition
mRNA_7285
mRNA_7286
mRNA_7287
mRNA_7288
mRNA_7289
15653
15654
15655
15656
15657
growth on ricinoleic acid
YNB Glucose
-0.3
-0.2
-0.5
0.1
growth on oleic acid
YNB Oleic Acid
-0.4
-0.3
-0.2
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.4
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.9
0.5
0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.5
0.1
0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.5
0.1
0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.7
0.0
0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.3
0.0
-0.3
auxotrophy
YNB Glucose
-0.4
0.1
-0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.5
0.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.2
-0.2
-0.1
auxotrophy
Dropout Complete
0.1
-0.1
0.1
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.2
-0.0
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.2
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
0.3
0.2
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.4
0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.0
0.0
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.3
0.2
0.1
growth on ypd
YPD
0.2
0.3
-0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.6
0.2
0.0
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