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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7281: 15649 - HMMPfam-FAR1 DNA-binding domain-PF03101, at 1288862 to 1290260
15649
mRNA_7282: 15650 - HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1290411 to 1292739
15650
mRNA_7283: 15651 - KOG1535 Predicted fumarylacetoacetate hydralase, at 1293181 to 1295231
15651
mRNA_7284: 15652 - KOG0537 Cytochrome b5, at 1295537 to 1296172
15652
mRNA_7285: 15653 - HMMPfam-GPR1/FUN34/yaaH family-PF01184,ProSitePatterns-GPR1/FUN34/yaaH family signature.-PS01114, at 1296567 to 1298156
15653
Group
Condition
mRNA_7281
mRNA_7282
mRNA_7283
mRNA_7284
mRNA_7285
15649
15650
15651
15652
15653
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
0.1
-2.2
-0.9
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.2
0.1
-0.2
-0.7
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.0
-0.2
-0.0
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.2
-0.3
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.0
-0.3
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.2
0.2
-0.2
-0.5
growth on ricinoleic acid
YNB Glucose
0.1
-0.2
-0.4
0.4
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.0
0.1
0.4
-0.5
growth on oleic acid
YNB Glucose
0.1
-0.2
-0.6
0.7
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
0.4
-0.5
0.0
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.5
-0.2
0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.1
0.0
0.5
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.0
-0.2
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.0
0.1
-0.0
0.1
auxotrophy
YNB Glucose
0.4
-0.1
0.1
0.3
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
0.2
0.0
0.3
-0.2
growth on oleic acid
YNB Oleic Acid
0.4
-0.1
-0.1
0.6
-0.4
auxotrophy
Dropout Complete
0.2
-0.1
-0.1
0.4
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.2
0.4
0.2
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.3
0.0
0.4
0.1
growth on ypd
YPD
0.1
0.1
0.2
0.8
0.2
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