Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7277: 15645 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1279656 to 1282236 15645 mRNA_7278: 15646 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1282472 to 1285388 15646 mRNA_7279: 15647 - K13698 ABHD4 abhydrolase domain-containing protein 4, at 1286393 to 1287273 15647 mRNA_7280: 15648 - Hypothetical Protein, at 1287531 to 1288393 15648 mRNA_7281: 15649 - HMMPfam-FAR1 DNA-binding domain-PF03101, at 1288862 to 1290260 15649
Group Condition mRNA_7277 mRNA_7278 mRNA_7279 mRNA_7280 mRNA_7281
15645
15646
15647
15648
15649
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.2 -0.4 -1.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.0 -0.7 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 0.2 0.0 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 0.2 0.1 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.2 0.2 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.1 0.2 0.0 0.0
growth on ricinoleic acid YNB Glucose 0.2 -0.0 0.0 0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.3 -0.3 0.5 0.0
auxotrophy Dropout Complete 0.1 -0.1 0.3 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 0.6 0.4 -0.1
growth on oleic acid YNB Glucose 0.0 0.0 -0.1 0.7 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 0.1 -0.4 0.5 0.1
growth on oleic acid YNB Oleic Acid 0.0 -0.0 -0.2 0.6 0.4
auxotrophy YNB Glucose 0.3 0.0 0.2 0.1 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 0.1 0.6 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.3 -0.1 0.6 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.0 -0.1 0.6 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.2 0.3 0.7 0.1
growth on ypd YPD 0.1 -0.0 0.4 1.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.4 0.8 0.6 0.7 0.2
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