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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7277: 15645 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1279656 to 1282236
15645
mRNA_7278: 15646 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1282472 to 1285388
15646
mRNA_7279: 15647 - K13698 ABHD4 abhydrolase domain-containing protein 4, at 1286393 to 1287273
15647
mRNA_7280: 15648 - Hypothetical Protein, at 1287531 to 1288393
15648
mRNA_7281: 15649 - HMMPfam-FAR1 DNA-binding domain-PF03101, at 1288862 to 1290260
15649
Group
Condition
mRNA_7277
mRNA_7278
mRNA_7279
mRNA_7280
mRNA_7281
15645
15646
15647
15648
15649
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.2
-0.4
-1.0
-0.4
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.1
0.0
-0.7
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.2
0.0
-0.3
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
0.2
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
0.2
0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.2
0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
0.1
0.2
0.0
0.0
growth on ricinoleic acid
YNB Glucose
0.2
-0.0
0.0
0.2
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.3
-0.3
0.5
0.0
auxotrophy
Dropout Complete
0.1
-0.1
0.3
0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.2
0.6
0.4
-0.1
growth on oleic acid
YNB Glucose
0.0
0.0
-0.1
0.7
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.1
-0.4
0.5
0.1
growth on oleic acid
YNB Oleic Acid
0.0
-0.0
-0.2
0.6
0.4
auxotrophy
YNB Glucose
0.3
0.0
0.2
0.1
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
0.1
0.6
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.3
-0.1
0.6
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.0
-0.1
0.6
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.2
0.3
0.7
0.1
growth on ypd
YPD
0.1
-0.0
0.4
1.1
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.8
0.6
0.7
0.2
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