Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7276: 15644 - K17806 PAM17, TIM23 mitochondrial import inner membrane translocase subunit TIM23, at 1278512 to 1279383 15644 mRNA_7277: 15645 - HMMPfam-Glycosyl hydrolases family 16-PF00722,SUPERFAMILY--SSF49899, at 1279656 to 1282236 15645 mRNA_7278: 15646 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1282472 to 1285388 15646 mRNA_7279: 15647 - K13698 ABHD4 abhydrolase domain-containing protein 4, at 1286393 to 1287273 15647 mRNA_7280: 15648 - Hypothetical Protein, at 1287531 to 1288393 15648
Group Condition mRNA_7276 mRNA_7277 mRNA_7278 mRNA_7279 mRNA_7280
15644
15645
15646
15647
15648
ypd buoyancy 40 hrs No Buoyancy Separation -1.3 -0.5 0.2 -0.4 -1.0
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.1 -0.1 0.0 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 0.2 0.0 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 -0.2 0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.0 0.3 -0.3 0.5
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.0 -0.1 0.2 0.1
growth on oleic acid YNB Oleic Acid -0.3 0.0 -0.0 -0.2 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.0 0.1 0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.0 -0.2 0.6 0.4
growth on ricinoleic acid YNB Glucose 0.1 0.2 -0.0 0.0 0.2
auxotrophy YNB Glucose -0.1 0.3 0.0 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.4 0.1 -0.4 0.5
growth on oleic acid YNB Glucose -0.1 0.0 0.0 -0.1 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.3 0.0 -0.1 0.6
auxotrophy Dropout Complete 0.2 0.1 -0.1 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.1 0.1 0.1 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.2 0.3 -0.1 0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.3 0.2 0.3 0.7
growth on ypd YPD -0.1 0.1 -0.0 0.4 1.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.4 0.8 0.6 0.7
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