Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_7244: 15612 - HMMPfam-PQ loop repeat-PF04193,SMART-Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins.-SM00679, at 1209765 to 1211262 15612 mRNA_7245: 15613 - K17972 NAA20, NAT3 N-terminal acetyltransferase B complex catalytic subunit, at 1211695 to 1212788 15613 mRNA_7246: 15614 - Hypothetical Protein, at 1212861 to 1214455 15614 mRNA_7247: 15615 - Hypothetical Protein, at 1214602 to 1216220 15615 mRNA_7248: 15616 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 1216413 to 1217523 15616
Group Condition mRNA_7244 mRNA_7245 mRNA_7246 mRNA_7247 mRNA_7248
15612
15613
15614
15615
15616
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   -0.1 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3   -0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   -0.2 0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.2   0.2 -0.3 -0.0
growth on oleic acid YNB Oleic Acid 0.1   0.1 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   0.0 0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4   -0.1 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.1 -0.1 0.1
auxotrophy Dropout Complete 0.4   0.3 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.4   0.0 -0.1 -0.1
growth on oleic acid YNB Glucose 0.1   0.0 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   0.1 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1   0.1 0.2 0.0
auxotrophy YNB Glucose 75mM Methionine 0.4   0.3 -0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2   0.1 0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1   0.5 0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.3   0.3 -0.0 0.1
auxotrophy YNB Glucose 0.4   0.4 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   0.5 0.1 0.1
growth on ypd YPD 0.3   0.2 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3   0.2 0.3 0.1
remove
mRNA_7244
plot		 remove
mRNA_7245
plot		 remove
mRNA_7246		 remove
mRNA_7247
plot		 remove
mRNA_7248
plot