Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7226: 15594 - HMMPfam-Demethylmenaquinone methyltransferase-PF03737,SUPERFAMILY--SSF89562, at 1175509 to 1176564 15594 mRNA_7227: 15595 - K03239 EIF2B1 translation initiation factor eIF-2B subunit alpha, at 1176800 to 1178543 15595 mRNA_7228: 15596 - KOG1674 Cyclin, at 1179153 to 1180280 15596 mRNA_7229: 15597 - Hypothetical Protein, at 1180715 to 1181387 15597 mRNA_7230: 15598 - K07019 K07019 uncharacterized protein, at 1181628 to 1183243 15598
Group Condition mRNA_7226 mRNA_7227 mRNA_7228 mRNA_7229 mRNA_7230
15594
15595
15596
15597
15598
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.9 -0.5 -2.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.6 0.0 -0.3 -3.0
ypd buoyancy 40 hrs High Buoyancy -0.2 0.1 -0.2 -1.1 -0.2
growth on oleic acid YNB Oleic Acid -0.2 -0.7 -0.1 -0.6 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -1.3 0.0 1.0 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.7 0.2 0.5 -1.4 0.3
growth on oleic acid YNB Glucose -0.3 0.1 -0.1 -0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.2 -0.2 0.4 -0.2
growth on ypd YPD -0.6 0.0 0.4 0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.8 0.2 -0.2 0.8 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.5 0.3 1.9 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.3 -0.1 0.8 -0.1
growth on ricinoleic acid YNB Glucose 0.2 0.7 0.1 0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 0.3 0.0 0.6 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.5 0.3 -0.2 0.8 0.1
auxotrophy Dropout Complete -0.3 0.3 0.6 1.0 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.9 0.8 2.2 -0.0
auxotrophy YNB Glucose -0.6 0.6 0.5 1.5 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.9 0.7 2.7 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.0 0.7 3.6 -0.5
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