Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7219: 15587 - K15053 CHMP7 charged multivesicular body protein 7, at 1158652 to 1160281 15587 mRNA_7220: 15588 - HMMPfam-zinc-RING finger domain-PF14634,ProSitePatterns-Zinc finger RING-type signature.-PS00518,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 1160377 to 1161832 15588 mRNA_7221: 15589 - K02133 ATPeF1B, ATP5B, ATP2 F-type H+-transporting ATPase subunit beta, at 1163041 to 1165362 15589 mRNA_7222: 15590 - KOG1572 Predicted protein tyrosine phosphatase, at 1165712 to 1166653 15590 mRNA_7223: 15591 - K19983 EXOC1, SEC3 exocyst complex component 1, at 1166927 to 1171458 15591
Group Condition mRNA_7219 mRNA_7220 mRNA_7221 mRNA_7222 mRNA_7223
15587
15588
15589
15590
15591
facs on lipid accumulation Sorted High BODIPY Gate -1.3 -1.0   0.0 -2.1
facs on lipid accumulation Sorted No BODIPY Gate -1.9 0.3   0.1 -2.4
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 -0.4   0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.9   0.5 -1.0
ypd buoyancy 40 hrs Low Buoyancy -1.2 -0.5   -0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 0.5   -0.2 0.2
growth on oleic acid YNB Glucose -0.8 0.2   -0.4 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -1.1 0.6   -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -1.4 0.1   0.2 0.0
auxotrophy YNB Glucose 75mM Arginine -1.1 0.1   0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.5 0.0   -0.4 -0.2
growth on ricinoleic acid YNB Glucose -1.0 0.4   -0.2 -0.1
auxotrophy Dropout Complete -2.2 0.5   0.5 0.2
auxotrophy YNB Glucose -0.8 -0.1   0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.4 0.2   0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 0.2   0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.9 0.0   0.0 -1.0
growth on ypd YPD 0.1 0.5   0.4 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 2.7 0.1   0.1 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.8 0.6   -0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 2.4 0.4   -0.2 -0.3
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