Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7210: 15578 - K15271 HFM1, MER3 ATP-dependent DNA helicase HFM1/MER3, at 1132597 to 1139005 15578 mRNA_7211: 15579 - HMMPfam-Fungal specific transcription factor domain-PF11951,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,SUPERFAMILY--SSF57701, at 1140051 to 1142038 15579 mRNA_7212: 15580 - KOG3764 Vesicular amine transporter, at 1142497 to 1144513 15580 mRNA_7213: 15581 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1144823 to 1146874 15581 mRNA_7214: 15582 - K17792 TIM54 mitochondrial import inner membrane translocase subunit TIM54, at 1147012 to 1148920 15582
Group Condition mRNA_7210 mRNA_7211 mRNA_7212 mRNA_7213 mRNA_7214
15578
15579
15580
15581
15582
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -0.1 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 -0.0 -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.0 0.1 -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 -0.1  
growth on ypd YPD 0.0 -0.2 0.1 -0.3  
growth on oleic acid YNB Oleic Acid -0.0 -0.1 0.3 -0.4  
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 -0.1 0.0  
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.0 0.3 -0.3  
growth on oleic acid YNB Glucose -0.0 -0.2 0.2 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.2 -0.0 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 0.2 -0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 0.1 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.0 0.1 0.0  
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1 -0.0 0.1  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.4 -0.0 -0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2 0.0 0.4  
auxotrophy YNB Glucose 0.1 0.4 0.1 -0.1  
auxotrophy Dropout Complete 0.2 0.3 0.1 -0.1  
growth on ricinoleic acid YNB Glucose 0.0 0.1 0.3 0.3  
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.0 0.3 0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.4 0.3 0.0  
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