Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7209: 15577 - K01408 IDE, ide insulysin, at 1127911 to 1131746 15577 mRNA_7210: 15578 - K15271 HFM1, MER3 ATP-dependent DNA helicase HFM1/MER3, at 1132597 to 1139005 15578 mRNA_7211: 15579 - HMMPfam-Fungal specific transcription factor domain-PF11951,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,SUPERFAMILY--SSF57701, at 1140051 to 1142038 15579 mRNA_7212: 15580 - KOG3764 Vesicular amine transporter, at 1142497 to 1144513 15580 mRNA_7213: 15581 - K14636 SLC18A3, VACHT MFS transporter, DHA1 family, solute carrier family 18 (vesicular acetylcholine transporter), member 3, at 1144823 to 1146874 15581
Group Condition mRNA_7209 mRNA_7210 mRNA_7211 mRNA_7212 mRNA_7213
15577
15578
15579
15580
15581
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.1 -0.4 -0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 -0.1 -0.0 -0.2
growth on oleic acid YNB Oleic Acid -0.0 -0.0 -0.1 0.3 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.0 -0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.2 -0.0 0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.1 -0.0 0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.0 -0.2 0.1 0.2
growth on oleic acid YNB Glucose 0.1 -0.0 -0.2 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.0 0.2 -0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.0 0.0 0.1 0.0
growth on ypd YPD 0.7 0.0 -0.2 0.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 0.1 0.4 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.1 0.2 0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 0.1 -0.0 0.1
growth on ricinoleic acid YNB Glucose -0.2 0.0 0.1 0.3 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.0 0.0 0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.1 0.2 0.0 0.4
auxotrophy Dropout Complete 0.2 0.2 0.3 0.1 -0.1
auxotrophy YNB Glucose 0.3 0.1 0.4 0.1 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.3 0.4 0.3 0.0
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