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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7195: 15563 - KOG0519 Sensory transduction histidine kinase, at 1094977 to 1103696
15563
mRNA_7196: 15564 - KOG3329 RAN guanine nucleotide release factor, at 1104031 to 1104798
15564
mRNA_7197: 15565 - KOG0490 Transcription factor, contains HOX domain, at 1105306 to 1105458
15565
mRNA_7198: 15566 - Hypothetical Protein, at 1107641 to 1108204
15566
mRNA_7199: 15567 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 1108363 to 1109217
15567
Group
Condition
mRNA_7195
mRNA_7196
mRNA_7197
mRNA_7198
mRNA_7199
15563
15564
15565
15566
15567
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
-2.3
-0.3
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-0.9
-0.7
-0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
-1.7
-0.1
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.3
0.0
-0.4
growth on ricinoleic acid
YNB Glucose
-1.0
-0.6
-0.2
-0.1
auxotrophy
YNB Glucose
-0.6
-0.7
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-1.2
0.1
-0.2
auxotrophy
Dropout Complete
-0.7
-1.3
0.6
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.7
0.2
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.9
0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-1.2
0.5
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-1.0
0.9
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
0.0
-0.3
0.2
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.1
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
1.3
-0.5
-0.1
growth on ypd
YPD
-0.0
-0.5
0.6
0.3
growth on oleic acid
YNB Glucose
-0.2
0.1
0.6
0.0
ypd buoyancy
40 hrs High Buoyancy
0.3
0.9
-0.7
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.4
0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.7
0.9
-0.7
ypd buoyancy
40 hrs Median Buoyancy
0.2
1.2
-0.2
0.2
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