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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7193: 15561 - K03678 RRP45, EXOSC9 exosome complex component RRP45, at 1091891 to 1093190
15561
mRNA_7194: 15562 - K12831 SF3B4, SAP49 splicing factor 3B subunit 4, at 1093562 to 1094787
15562
mRNA_7195: 15563 - KOG0519 Sensory transduction histidine kinase, at 1094977 to 1103696
15563
mRNA_7196: 15564 - KOG3329 RAN guanine nucleotide release factor, at 1104031 to 1104798
15564
mRNA_7197: 15565 - KOG0490 Transcription factor, contains HOX domain, at 1105306 to 1105458
15565
Group
Condition
mRNA_7193
mRNA_7194
mRNA_7195
mRNA_7196
mRNA_7197
15561
15562
15563
15564
15565
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
-2.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.0
-1.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.5
-0.9
auxotrophy
Dropout Complete
-0.7
-1.3
growth on ricinoleic acid
YNB Glucose
-1.0
-0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-1.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.3
auxotrophy
YNB Glucose
-0.6
-0.7
auxotrophy
YNB Glucose 75mM Arginine
-0.4
-0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.7
growth on ypd
YPD
-0.0
-0.5
growth on oleic acid
YNB Oleic Acid
0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-1.0
0.9
growth on oleic acid
YNB Glucose
-0.2
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.7
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
1.3
ypd buoyancy
40 hrs High Buoyancy
0.3
0.9
ypd buoyancy
40 hrs Median Buoyancy
0.2
1.2
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