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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7185: 15553 - K07300 chaA, CAX Ca2+-H+ antiporter, at 1073734 to 1075504
15553
mRNA_7186: 15554 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 1076175 to 1077434
15554
mRNA_7187: 15555 - K00799 GST, gst glutathione S-transferase, at 1078722 to 1079084
15555
mRNA_7188: 15556 - K01870 IARS, ileS isoleucyl-tRNA synthetase, at 1079394 to 1083450
15556
mRNA_7189: 15557 - K14847 RPF2 ribosome production factor 2, at 1083757 to 1085072
15557
Group
Condition
mRNA_7185
mRNA_7186
mRNA_7187
mRNA_7188
mRNA_7189
15553
15554
15555
15556
15557
facs on lipid accumulation
Sorted No BODIPY Gate
-1.2
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.1
-0.2
-0.3
auxotrophy
Dropout Complete
-0.2
-0.6
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-1.1
0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.0
-0.7
auxotrophy
YNB Glucose
-0.3
-0.2
-0.5
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.3
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.3
0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.4
-0.6
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.7
0.5
growth on oleic acid
YNB Glucose
-0.2
-0.2
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.3
0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.1
0.7
growth on ricinoleic acid
YNB Glucose
0.1
-0.0
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.6
0.9
growth on ypd
YPD
0.0
-0.0
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
0.3
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.2
0.7
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