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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7181: 15549 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 1064763 to 1065253
15549
mRNA_7182: 15550 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1065505 to 1067037
15550
mRNA_7183: 15551 - Hypothetical Protein, at 1068155 to 1071791
15551
mRNA_7184: 15552 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 1072312 to 1073593
15552
mRNA_7185: 15553 - K07300 chaA, CAX Ca2+-H+ antiporter, at 1073734 to 1075504
15553
Group
Condition
mRNA_7181
mRNA_7182
mRNA_7183
mRNA_7184
mRNA_7185
15549
15550
15551
15552
15553
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.6
-0.1
-0.2
-1.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.5
-0.1
-0.0
-1.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.1
0.1
-0.6
-0.3
growth on oleic acid
YNB Glucose
-0.3
-0.3
-0.1
-0.1
-0.2
growth on ypd
YPD
-0.1
-0.6
-0.3
0.6
0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.1
0.1
-0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
0.1
-0.0
-0.5
-0.4
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.2
-0.0
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.1
-0.0
0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.3
-0.0
-0.0
0.3
auxotrophy
Dropout Complete
0.1
0.3
-0.3
0.0
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.0
0.1
-0.4
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.2
0.0
0.1
-0.2
growth on ricinoleic acid
YNB Glucose
0.0
-0.1
0.1
-0.1
0.1
auxotrophy
YNB Glucose
0.2
-0.0
-0.0
0.2
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.4
-0.2
-0.1
-0.2
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.5
-0.1
-0.4
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.4
-0.2
0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.1
0.1
-0.1
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.0
0.0
-0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
0.4
0.3
-0.0
-0.1
0.4
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