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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7168: 15536 - HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1036576 to 1038409
15536
mRNA_7169: 15537 - K13137 STRAP, UNRIP serine-threonine kinase receptor-associated protein, at 1038666 to 1040206
15537
mRNA_7170: 15538 - Hypothetical Protein, at 1040461 to 1043299
15538
mRNA_7171: 15539 - Hypothetical Protein, at 1043554 to 1044696
15539
mRNA_7172: 15540 - K01408 IDE, ide insulysin, at 1045325 to 1049371
15540
Group
Condition
mRNA_7168
mRNA_7169
mRNA_7170
mRNA_7171
mRNA_7172
15536
15537
15538
15539
15540
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-1.6
-0.5
-0.3
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.6
-0.3
-1.3
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-1.2
-0.1
-1.4
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-1.6
-0.3
-0.3
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-1.0
-0.2
-0.9
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.6
-0.2
-0.4
0.4
growth on ypd
YPD
0.1
-0.9
-0.2
0.0
0.1
growth on ricinoleic acid
YNB Glucose
0.0
-0.3
0.2
-0.4
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
-0.0
0.2
-0.4
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.0
-0.3
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.5
0.1
-0.0
-0.5
ypd buoyancy
40 hrs Low Buoyancy
-0.0
0.4
0.0
-0.5
0.2
growth on oleic acid
YNB Glucose
-0.1
0.2
0.3
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-1.3
0.8
0.4
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.7
0.4
0.3
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.8
0.2
-0.7
-0.1
auxotrophy
Dropout Complete
-0.1
1.3
0.1
0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.1
0.7
0.3
0.6
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
1.2
0.3
0.4
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
1.2
0.2
0.5
0.0
auxotrophy
YNB Glucose
0.0
1.0
0.3
0.5
0.1
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