Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7166: 15534 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 1033157 to 1035237 15534 mRNA_7167: 15535 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1035415 to 1036383 15535 mRNA_7168: 15536 - HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1036576 to 1038409 15536 mRNA_7169: 15537 - K13137 STRAP, UNRIP serine-threonine kinase receptor-associated protein, at 1038666 to 1040206 15537 mRNA_7170: 15538 - Hypothetical Protein, at 1040461 to 1043299 15538
Group Condition mRNA_7166 mRNA_7167 mRNA_7168 mRNA_7169 mRNA_7170
15534
15535
15536
15537
15538
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.1 -0.2 -1.6 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.1 -0.0 -1.6 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.2 -0.1 -1.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.0 -0.1 -1.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.2 -0.2 -0.6 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.7 0.1 -0.7 0.4
growth on ypd YPD -0.1 0.1 0.1 -0.9 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.5 0.1 0.5 0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.4 0.0 -0.3 0.2
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.2 -0.1 -0.6 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 0.1 -1.3 0.8
growth on oleic acid YNB Glucose 0.0 -0.3 -0.1 0.2 0.3
growth on oleic acid YNB Oleic Acid -0.2 -0.3 -0.1 0.7 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.1 -0.0 0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.2 0.2 0.8 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.0 -0.0 0.4 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.4 -0.0 -0.0 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 0.0 -0.1 1.2 0.2
auxotrophy Dropout Complete -0.1 0.0 -0.1 1.3 0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 0.0 -0.2 1.2 0.3
auxotrophy YNB Glucose 0.2 0.1 0.0 1.0 0.3
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