Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7165: 15533 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 1031482 to 1033004 15533 mRNA_7166: 15534 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 1033157 to 1035237 15534 mRNA_7167: 15535 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1035415 to 1036383 15535 mRNA_7168: 15536 - HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1036576 to 1038409 15536 mRNA_7169: 15537 - K13137 STRAP, UNRIP serine-threonine kinase receptor-associated protein, at 1038666 to 1040206 15537
Group Condition mRNA_7165 mRNA_7166 mRNA_7167 mRNA_7168 mRNA_7169
15533
15534
15535
15536
15537
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 -0.7 0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.2 0.1 -0.2 -1.6
facs on lipid accumulation Sorted High BODIPY Gate   -0.3 -0.1 0.1 -1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.1 0.1 -0.0 -1.6
ypd buoyancy 40 hrs No Buoyancy Separation   0.2 -0.2 -0.1 -1.2
growth on ricinoleic acid YNB Glucose   -0.3 -0.4 0.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 0.0 -0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid   -0.9 -0.5 0.1 0.5
growth on ypd YPD   -0.1 0.1 0.1 -0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 -0.2 -0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy   0.3 -0.2 -0.1 -0.6
growth on oleic acid YNB Glucose   0.0 -0.3 -0.1 0.2
growth on oleic acid YNB Oleic Acid   -0.2 -0.3 -0.1 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.4 -0.2 0.2 0.8
ypd buoyancy 40 hrs Median Buoyancy   0.4 0.1 -0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy   0.2 0.0 -0.0 0.4
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 0.4 -0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine   -0.1 0.0 -0.1 1.2
auxotrophy Dropout Complete   -0.1 0.0 -0.1 1.3
auxotrophy YNB Glucose 75mM Methionine   0.2 0.0 -0.2 1.2
auxotrophy YNB Glucose   0.2 0.1 0.0 1.0
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