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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1025200 to 1027264
15530
mRNA_7163: 15531 - Hypothetical Protein, at 1027440 to 1028287
15531
mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1028429 to 1031367
15532
mRNA_7165: 15533 - K01867 WARS, trpS tryptophanyl-tRNA synthetase, at 1031482 to 1033004
15533
mRNA_7166: 15534 - K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase, at 1033157 to 1035237
15534
Group
Condition
mRNA_7162
mRNA_7163
mRNA_7164
mRNA_7165
mRNA_7166
15530
15531
15532
15533
15534
ypd buoyancy
40 hrs No Buoyancy Separation
-1.1
-0.5
-0.2
0.2
growth on oleic acid
YNB Glucose
-0.3
-0.6
-0.2
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
-0.1
-0.2
-0.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.5
-0.3
-0.3
0.1
growth on oleic acid
YNB Oleic Acid
-0.1
-0.4
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.2
-0.1
0.2
growth on ypd
YPD
-0.2
-0.1
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.3
0.1
-0.4
growth on ricinoleic acid
YNB Glucose
-0.2
0.0
0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
-0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
-0.1
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.2
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.3
-0.0
-0.1
auxotrophy
Dropout Complete
0.2
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
0.1
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.1
0.2
-0.3
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.2
-0.0
0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
0.1
0.4
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.0
0.1
0.3
auxotrophy
YNB Glucose
0.3
0.2
-0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.1
0.2
0.2
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