Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1019624 to 1022322 15528 mRNA_7161: 15529 - Hypothetical Protein, at 1022593 to 1024140 15529 mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1025200 to 1027264 15530 mRNA_7163: 15531 - Hypothetical Protein, at 1027440 to 1028287 15531 mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1028429 to 1031367 15532
Group Condition mRNA_7160 mRNA_7161 mRNA_7162 mRNA_7163 mRNA_7164
15528
15529
15530
15531
15532
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 -0.6 -1.1 -0.5 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.7 -0.0 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.6 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.6 0.2 -0.3 -0.0
growth on oleic acid YNB Glucose 0.3 -0.1 -0.3 -0.6 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.4 -0.1 -0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.2 -0.5 -0.3 -0.3
growth on oleic acid YNB Oleic Acid -0.1 0.1 -0.1 -0.4 -0.2
growth on ypd YPD -0.2 0.0 -0.2 -0.1 -0.2
auxotrophy Dropout Complete -0.1 -0.3 0.2 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 -0.2 -0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.1 -0.1 -0.2 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.4 -0.0 0.0 0.1
growth on ricinoleic acid YNB Glucose -0.2 0.1 -0.2 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 0.2 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.5 -0.2 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.4 -0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.1 0.1 -0.2 -0.1
auxotrophy YNB Glucose -0.1 -0.1 0.3 0.2 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 0.2 -0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.0 0.5 -0.1 0.2
remove
mRNA_7160
plot
remove
mRNA_7161
plot
remove
mRNA_7162
remove
mRNA_7163
plot
remove
mRNA_7164
plot