Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1014163 to 1016901 15526 mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1017040 to 1019381 15527 mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1019624 to 1022322 15528 mRNA_7161: 15529 - Hypothetical Protein, at 1022593 to 1024140 15529 mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1025200 to 1027264 15530
Group Condition mRNA_7158 mRNA_7159 mRNA_7160 mRNA_7161 mRNA_7162
15526
15527
15528
15529
15530
ypd buoyancy 40 hrs No Buoyancy Separation -1.7 -0.4 0.6 -0.6 -1.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.8 -0.5 -0.7 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.8 -0.3 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.1 -0.3 -0.1 -0.6
growth on ricinoleic acid YNB Glucose -0.5 -0.4 -0.2 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 -0.2 -0.6 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 -0.4 -0.1 0.5 -0.2
growth on ypd YPD -0.6 0.1 -0.2 0.0 -0.2
auxotrophy YNB Glucose -0.7 -0.1 -0.1 -0.1 0.3
auxotrophy Dropout Complete -0.4 -0.1 -0.1 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2 0.0 0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.2 -0.0 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.0 0.1 0.3 -0.4
growth on oleic acid YNB Glucose 0.1 -0.5 0.3 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 -0.0 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 0.1 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 0.0 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 0.2 0.0 -0.4 -0.0
growth on oleic acid YNB Oleic Acid 0.5 -0.3 -0.1 0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.2 -0.0 0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.2 0.0 -0.0 0.5
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