Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7156: 15524 - K20102 YTHDF YTH domain-containing family protein, at 1010794 to 1011457 15524 mRNA_7157: 15525 - KOG2936 Uncharacterized conserved protein, at 1012325 to 1013982 15525 mRNA_7158: 15526 - K09529 DNAJC9 DnaJ homolog subfamily C member 9, at 1014163 to 1016901 15526 mRNA_7159: 15527 - HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1017040 to 1019381 15527 mRNA_7160: 15528 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 1019624 to 1022322 15528
Group Condition mRNA_7156 mRNA_7157 mRNA_7158 mRNA_7159 mRNA_7160
15524
15525
15526
15527
15528
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 0.3 -1.7 -0.4 0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.5 -0.2 -0.8 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.8 -0.5 -0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.4 -0.8 -0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.7 -0.4 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.3 -0.5 -0.1 -0.3
auxotrophy YNB Glucose 0.4 -0.6 -0.7 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 1.0 -0.8 -0.2 -0.8 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.5 -0.3 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6 -0.3 -0.1 0.1
growth on ricinoleic acid YNB Glucose 0.9 -0.5 -0.5 -0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.5 0.1 0.2 -0.0
auxotrophy Dropout Complete 0.4 -0.6 -0.4 -0.1 -0.1
growth on oleic acid YNB Glucose 0.1 -0.6 0.1 -0.5 0.3
growth on ypd YPD 0.1 0.1 -0.6 0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.6 -0.0 0.2 0.0
growth on oleic acid YNB Oleic Acid 0.4 -0.2 0.5 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.0 0.0 -0.4 -0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.1 0.2 -0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.3 0.2 -0.1 0.0
ypd buoyancy 40 hrs High Buoyancy 0.3 0.2 0.3 0.2 0.0
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