Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976528 to 979510 15509 mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979628 to 983826 15510 mRNA_7143: 15511 - HMMPfam-Protein of unknown function (DUF2421)-PF10334,HMMPfam-Fusaric acid resistance protein-like-PF13515,PRINTS-Brefeldin A-sensitivity protein 4 signature-PR02047,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 984352 to 987514 15511 mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988436 to 990722 15512 mRNA_7145: 15513 - BLAST putative ccch zinc finger dna binding protein [Eu..., at 991165 to 992673 15513
Group Condition mRNA_7141 mRNA_7142 mRNA_7143 mRNA_7144 mRNA_7145
15509
15510
15511
15512
15513
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 0.4 -0.2 -0.2 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.2 -0.5 -0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 0.0 0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.1 -0.3 -0.0
growth on oleic acid YNB Glucose 0.0 -0.1 -0.4 0.1 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.6 -0.3 -0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.0 0.2 0.0 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.3 -0.2 -0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.1 -0.2 -0.0 -0.2
growth on oleic acid YNB Oleic Acid 0.1 0.3 -0.2 0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.2 0.5 0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 0.0 -0.1 0.3 0.1
growth on ricinoleic acid YNB Glucose 0.6 -0.2 -0.2 0.1 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 0.1 0.1 0.2
auxotrophy YNB Glucose -0.0 -0.0 -0.2 0.3 0.4
auxotrophy Dropout Complete 0.1 -0.1 -0.1 0.5 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.3 0.1 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.1 0.2 0.1 0.1
growth on ypd YPD 0.2 0.1 0.3 0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.5 0.1 0.1 0.1
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