Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971914 to 976417 15508 mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976528 to 979510 15509 mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979628 to 983826 15510 mRNA_7143: 15511 - HMMPfam-Protein of unknown function (DUF2421)-PF10334,HMMPfam-Fusaric acid resistance protein-like-PF13515,PRINTS-Brefeldin A-sensitivity protein 4 signature-PR02047,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 984352 to 987514 15511 mRNA_7144: 15512 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 988436 to 990722 15512
Group Condition mRNA_7140 mRNA_7141 mRNA_7142 mRNA_7143 mRNA_7144
15508
15509
15510
15511
15512
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.4 0.4 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.4 -0.6 -0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1 -0.0 -0.1 -0.3
growth on oleic acid YNB Glucose -0.0 0.0 -0.1 -0.4 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.5 -0.2 -0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.2 -0.3 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.1 -0.4 0.0 0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 0.1 0.1 -0.1 0.1
auxotrophy YNB Glucose 0.2 -0.0 -0.0 -0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.2 0.1 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.1 -0.0 -0.2 0.5
growth on ricinoleic acid YNB Glucose 0.0 0.6 -0.2 -0.2 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 0.0 -0.1 0.3
auxotrophy Dropout Complete 0.0 0.1 -0.1 -0.1 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.1 0.1 0.1 0.1
growth on oleic acid YNB Oleic Acid 0.2 0.1 0.3 -0.2 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 -0.0 0.2 0.0
growth on ypd YPD -0.0 0.2 0.1 0.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1 0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.2 0.3 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.1 0.5 0.1 0.1
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