Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7138: 15506 - K14655 RIB2, PUS8 tRNA pseudouridine synthase 8 / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase, at 968699 to 969330 15506 mRNA_7139: 15507 - K15272 SLC35A1_2_3 solute carrier family 35 (UDP-sugar transporter), member A1/2/3, at 969483 to 971578 15507 mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971914 to 976417 15508 mRNA_7141: 15509 - BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC...., at 976528 to 979510 15509 mRNA_7142: 15510 - HMMPfam-Domain of unknown function DUF221-PF02714,HMMPfam-Late exocytosis, associated with Golgi transport-PF13967, at 979628 to 983826 15510
Group Condition mRNA_7138 mRNA_7139 mRNA_7140 mRNA_7141 mRNA_7142
15506
15507
15508
15509
15510
ypd buoyancy 40 hrs No Buoyancy Separation   -0.0 -0.4 -0.4 0.4
facs on lipid accumulation Sorted No BODIPY Gate   0.0 0.2 -0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy   -0.2 -0.2 0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate   -0.4 -0.1 0.5 -0.2
ypd buoyancy 40 hrs Median Buoyancy   0.2 0.0 -0.1 -0.0
growth on oleic acid YNB Glucose   0.3 -0.0 0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine   0.3 0.2 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate   0.1 0.1 0.1 -0.0
growth on ypd YPD   0.1 -0.0 0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.4 0.0 0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.0 0.3 0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.1 0.2 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.7 -0.0 0.4 -0.6
auxotrophy YNB Glucose 75mM Arginine   0.4 0.2 -0.1 0.0
auxotrophy Dropout Complete   0.7 0.0 0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.0 0.2 0.2 0.3
auxotrophy YNB Glucose   0.6 0.2 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy   0.5 0.2 -0.1 0.1
growth on ricinoleic acid YNB Glucose   0.4 0.0 0.6 -0.2
growth on oleic acid YNB Oleic Acid   0.3 0.2 0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.0 0.4 0.1 0.5
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