Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7136: 15504 - K01880 GARS, glyS1 glycyl-tRNA synthetase, at 961158 to 963860 15504 mRNA_7137: 15505 - KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein), at 964045 to 968474 15505 mRNA_7138: 15506 - K14655 RIB2, PUS8 tRNA pseudouridine synthase 8 / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase, at 968699 to 969330 15506 mRNA_7139: 15507 - K15272 SLC35A1_2_3 solute carrier family 35 (UDP-sugar transporter), member A1/2/3, at 969483 to 971578 15507 mRNA_7140: 15508 - KOG1029 Endocytic adaptor protein intersectin, at 971914 to 976417 15508
Group Condition mRNA_7136 mRNA_7137 mRNA_7138 mRNA_7139 mRNA_7140
15504
15505
15506
15507
15508
growth on ricinoleic acid YNB Methylricinoleic Acid   -3.2   0.4 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   -2.9   0.7 -0.0
growth on ricinoleic acid YNB Glucose   -1.4   0.4 0.0
ypd buoyancy 40 hrs No Buoyancy Separation   -0.3   -0.0 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1   -0.4 -0.1
auxotrophy YNB Glucose   -1.0   0.6 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.3   -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine   -0.8   0.4 0.2
ypd buoyancy 40 hrs High Buoyancy   0.2   -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.6   0.3 0.2
facs on lipid accumulation Sorted No BODIPY Gate   -0.2   0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.4   0.0 0.4
facs on lipid accumulation Sorted High BODIPY Gate   -0.2   0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1   -0.0 0.2
growth on ypd YPD   0.0   0.1 -0.0
growth on oleic acid YNB Glucose   -0.2   0.3 -0.0
growth on oleic acid YNB Oleic Acid   -0.3   0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1   -0.0 0.3
ypd buoyancy 40 hrs Median Buoyancy   0.1   0.2 0.0
auxotrophy Dropout Complete   -0.2   0.7 0.0
ypd buoyancy 40 hrs Low Buoyancy   0.1   0.5 0.2
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