Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7133: 15501 - Hypothetical Protein, at 954831 to 956443 15501 mRNA_7134: 15502 - Hypothetical Protein, at 959063 to 959893 15502 mRNA_7135: 15503 - K02948 RP-S11, MRPS11, rpsK small subunit ribosomal protein S11, at 960089 to 960921 15503 mRNA_7136: 15504 - K01880 GARS, glyS1 glycyl-tRNA synthetase, at 961158 to 963860 15504 mRNA_7137: 15505 - KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein), at 964045 to 968474 15505
Group Condition mRNA_7133 mRNA_7134 mRNA_7135 mRNA_7136 mRNA_7137
15501
15502
15503
15504
15505
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.5     -3.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.4     -2.9
growth on ricinoleic acid YNB Glucose -0.6 0.4     -1.4
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 0.6     -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.1     -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0     0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.1     -0.1
growth on oleic acid YNB Glucose 0.2 0.1     -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 0.1     0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1     0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.2     -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.0     -0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.4     -0.6
auxotrophy YNB Glucose 0.9 0.4     -1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 -0.0     -0.4
growth on ypd YPD -0.4 0.7     0.0
auxotrophy YNB Glucose 75mM Arginine 0.7 0.4     -0.8
growth on oleic acid YNB Oleic Acid 0.3 0.4     -0.3
auxotrophy Dropout Complete 0.5 0.4     -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 0.0     0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 0.5     -0.1
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