Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7109: 15477 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 903883 to 906158 15477 mRNA_7110: 15478 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 906529 to 908168 15478 mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908449 to 909688 15479 mRNA_7112: 15480 - Interpro DNA-directed RNA polymerase I subunit RPA34.5 0, at 910088 to 911391 15480 mRNA_7113: 15481 - Hypothetical Protein, at 911603 to 912181 15481
Group Condition mRNA_7109 mRNA_7110 mRNA_7111 mRNA_7112 mRNA_7113
15477
15478
15479
15480
15481
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.9 -0.7 -0.3 -2.7
growth on ypd YPD -0.3 -0.1 0.0 0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.0 -0.3 -0.1 -0.9
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 0.3 0.1 -0.8
auxotrophy YNB Glucose -0.1 -0.4 0.3 -0.6 0.2
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 0.5 -0.3 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 0.3 -0.3 -0.1
auxotrophy Dropout Complete -0.3 0.1 0.3 -0.8 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.0 0.2 -0.2 0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 0.6 -0.4 -0.1
growth on oleic acid YNB Glucose -0.2 -0.2 -0.0 -0.3 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 0.3 0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2 0.0 0.1 0.3 -0.4
growth on ricinoleic acid YNB Glucose -0.1 -0.0 0.3 0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.1 0.4 0.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.2 0.5 0.2 0.1
growth on oleic acid YNB Oleic Acid 0.1 0.1 -0.0 -0.0 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.0 0.2 -0.1 0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.0 0.5 0.2 0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.3 -0.1 0.2 1.7
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.5 0.9 0.1 0.8
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