Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7107: 15475 - KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain, at 897416 to 899091 15475 mRNA_7108: 15476 - HMMPfam-Arrestin (or S-antigen), C-terminal domain-PF02752,SMART-Arrestin (or S-antigen), C-terminal domain-SM01017,SUPERFAMILY--SSF81296, at 899228 to 903559 15476 mRNA_7109: 15477 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 903883 to 906158 15477 mRNA_7110: 15478 - HMMPfam-Zinc-binding dehydrogenase-PF00107,HMMPfam-Alcohol dehydrogenase GroES-like domain-PF08240,SMART-Enoylreductase-SM00829,SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735, at 906529 to 908168 15478 mRNA_7111: 15479 - Interpro Subunit 11 of the general transcription factor TFIIH, at 908449 to 909688 15479
Group Condition mRNA_7107 mRNA_7108 mRNA_7109 mRNA_7110 mRNA_7111
15475
15476
15477
15478
15479
facs on lipid accumulation Sorted Low BODIPY Gate -2.3 -0.1 -0.0 -0.3 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 0.3 0.2 -0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.3 -0.5 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 -0.1 -0.4 0.0 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.3 0.0 -0.9 -0.7
growth on oleic acid YNB Glucose -0.3 -0.0 -0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.5 -0.3 -0.4 -0.0 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.0 -0.6 -0.1 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.0 -0.2 -0.1 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.6 0.2 -0.0 -0.2 0.3
growth on ricinoleic acid YNB Glucose -0.5 0.1 -0.1 -0.0 0.3
auxotrophy YNB Glucose 0.0 -0.1 -0.1 -0.4 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 -0.4 -0.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 0.0 -0.2 0.5
growth on oleic acid YNB Oleic Acid -0.2 -0.2 0.1 0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 0.0 -0.2 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 -0.1 0.6
growth on ypd YPD 0.4 0.1 -0.3 -0.1 0.0
auxotrophy Dropout Complete 0.3 -0.0 -0.3 0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.0 -0.4 0.5 0.9
ypd buoyancy 40 hrs Low Buoyancy 0.7 0.3 0.1 -0.2 0.3
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