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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7101: 15469 - K08968 E1.8.4.14 L-methionine (R)-S-oxide reductase, at 881719 to 882426
15469
mRNA_7102: 15470 - K03441 GLP-F aquaglyceroporin related protein, other eukaryote, at 882881 to 885755
15470
mRNA_7103: 15471 - Hypothetical Protein, at 887005 to 887880
15471
mRNA_7104: 15472 - K09448 TEAD transcriptional enhancer factor, at 888433 to 891786
15472
mRNA_7105: 15473 - KOG1890 Phosphoinositide phosphatase SAC1, at 892209 to 895612
15473
Group
Condition
mRNA_7101
mRNA_7102
mRNA_7103
mRNA_7104
mRNA_7105
15469
15470
15471
15472
15473
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
-0.4
-3.5
0.4
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.3
-1.8
-0.3
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.2
-2.7
-0.5
0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.1
-1.5
0.4
-0.3
growth on ypd
YPD
-0.0
-0.1
-1.6
0.2
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
-0.1
-0.8
0.3
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.0
-0.1
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.2
0.4
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
0.1
-0.4
0.6
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
0.5
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
0.3
-0.2
0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.1
0.4
-0.3
0.3
growth on ricinoleic acid
YNB Glucose
0.3
0.1
-0.2
0.6
-0.3
auxotrophy
Dropout Complete
-0.0
-0.1
0.0
0.7
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.3
0.6
-0.4
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.0
-0.0
0.8
-0.1
0.1
growth on oleic acid
YNB Oleic Acid
-0.3
0.2
1.0
0.2
-0.2
auxotrophy
YNB Glucose
0.1
0.1
0.0
0.6
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.2
1.3
-0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.4
1.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
0.1
0.8
0.7
0.2
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