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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7096: 15464 - K16729 CHORDC1, CHP1 cysteine and histidine-rich domain-containing protein 1, at 874025 to 875519
15464
mRNA_7097: 15465 - K03064 PSMC6, RPT4 26S proteasome regulatory subunit T4, at 875663 to 877708
15465
mRNA_7098: 15466 - KOG2633 Hismacro and SEC14 domain-containing proteins, at 877934 to 879350
15466
mRNA_7099: 15467 - K12845 SNU13, NHP2L U4/U6 small nuclear ribonucleoprotein SNU13, at 879733 to 880505
15467
mRNA_7100: 15468 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 880881 to 881621
15468
Group
Condition
mRNA_7096
mRNA_7097
mRNA_7098
mRNA_7099
mRNA_7100
15464
15465
15466
15467
15468
ypd buoyancy
40 hrs High Buoyancy
-1.5
-0.0
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.5
-0.4
auxotrophy
YNB Glucose
-1.2
-0.0
0.2
auxotrophy
Dropout Complete
-0.7
0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.6
-0.3
0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.3
0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
0.1
0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.5
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.0
-0.3
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.2
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.2
0.1
growth on oleic acid
YNB Glucose
0.3
-0.0
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.1
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.2
0.9
growth on ypd
YPD
1.1
0.2
-0.4
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