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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7084: 15452 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 842141 to 843806
15452
mRNA_7085: 15453 - HMMPfam-TRF2-interacting telomeric protein/Rap1 - C terminal domain-PF11626,SUPERFAMILY--SSF46689, at 843971 to 847409
15453
mRNA_7086: 15454 - HMMPfam-Shugoshin C terminus-PF07557, at 847556 to 851531
15454
mRNA_7087: 15455 - Hypothetical Protein, at 851570 to 853119
15455
mRNA_7088: 15456 - K10739 RFA2, RPA2 replication factor A2, at 853910 to 855078
15456
Group
Condition
mRNA_7084
mRNA_7085
mRNA_7086
mRNA_7087
mRNA_7088
15452
15453
15454
15455
15456
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-1.5
-0.7
-3.0
growth on ricinoleic acid
YNB Glucose
-0.2
-1.0
-0.1
0.3
auxotrophy
Dropout Complete
0.3
-1.7
0.1
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.4
0.1
-0.6
growth on oleic acid
YNB Glucose
-0.2
-0.6
-0.1
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-1.1
0.1
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.2
0.2
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.9
-0.3
0.8
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.2
-0.0
-0.3
auxotrophy
YNB Glucose
0.4
-0.7
0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.8
-0.0
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.2
-0.5
0.8
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.3
0.2
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.2
-0.1
0.2
growth on oleic acid
YNB Oleic Acid
-0.1
0.8
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.4
0.3
-0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.6
-0.8
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
1.1
-0.7
1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.9
-0.3
1.1
growth on ypd
YPD
0.2
2.6
0.0
0.7
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