Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7074: 15442 - K02218 CSNK1, CKI casein kinase 1, at 821512 to 823166 15442 mRNA_7075: 15443 - HMMPfam-Late embryogenesis abundant protein-PF03168,SUPERFAMILY--SSF117070, at 823708 to 824890 15443 mRNA_7076: 15444 - K17413 MRPS35 small subunit ribosomal protein S35, at 825955 to 826915 15444 mRNA_7077: 15445 - K18789 XGD1 xylogalacturonan beta-1,3-xylosyltransferase, at 827085 to 831280 15445 mRNA_7078: 15446 - Hypothetical Protein, at 831735 to 832558 15446
Group Condition mRNA_7074 mRNA_7075 mRNA_7076 mRNA_7077 mRNA_7078
15442
15443
15444
15445
15446
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4   -0.7 -1.0
growth on ypd YPD   -0.4   0.2 -0.6
growth on ricinoleic acid YNB Glucose   -0.4   0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy   0.1   -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.4   0.9 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid   -0.7   0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.2   -0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate   -0.9   0.7 0.5
ypd buoyancy 40 hrs Low Buoyancy   0.0   0.5 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.6   -0.0 1.3
facs on lipid accumulation Sorted Low BODIPY Gate   -0.6   0.6 0.9
facs on lipid accumulation Sorted High BODIPY Gate   -0.4   0.6 0.9
growth on oleic acid YNB Oleic Acid   0.1   0.9 0.1
growth on oleic acid YNB Glucose   0.5   0.5 0.3
auxotrophy YNB Glucose 75mM Methionine   0.4   0.2 0.9
auxotrophy YNB Glucose 75mM Arginine   0.3   0.1 1.3
auxotrophy Dropout Complete   0.3   0.5 1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1   0.0 1.7
auxotrophy YNB Glucose   0.4   0.3 1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   -0.2   0.1 1.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.1   -0.1 2.4
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