Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7071: 15439 - BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF..., at 814580 to 815327 15439 mRNA_7072: 15440 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 815614 to 818476 15440 mRNA_7073: 15441 - HMMPfam-Domain of unknown function DUF77-PF01910,SUPERFAMILY--SSF89957,TIGRFAM-TIGR00106 uncharacterized protein, MTH1187 family-TIGR00106, at 819072 to 820252 15441 mRNA_7074: 15442 - K02218 CSNK1, CKI casein kinase 1, at 821512 to 823166 15442 mRNA_7075: 15443 - HMMPfam-Late embryogenesis abundant protein-PF03168,SUPERFAMILY--SSF117070, at 823708 to 824890 15443
Group Condition mRNA_7071 mRNA_7072 mRNA_7073 mRNA_7074 mRNA_7075
15439
15440
15441
15442
15443
ypd buoyancy 40 hrs No Buoyancy Separation 0.9 -0.6 -2.0   -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.5 -0.1   -0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.4 0.3   -0.9
auxotrophy Dropout Complete 0.3 0.1 -0.9   0.3
auxotrophy YNB Glucose 0.3 0.0 -0.8   0.4
growth on ypd YPD -0.0 0.5 0.0   -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 0.0 0.3   -0.6
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.4 -0.1   0.4
ypd buoyancy 40 hrs Low Buoyancy 0.8 -0.0 -0.4   0.0
facs on lipid accumulation Sorted High BODIPY Gate 1.1 -0.4 0.2   -0.4
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 0.3   0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.8 -0.2 -0.0   0.1
ypd buoyancy 40 hrs High Buoyancy 0.5 -0.2 0.3   0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 0.2 0.2   0.3
growth on oleic acid YNB Glucose 0.6 0.3 -0.5   0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.1 0.6   -0.2
growth on ricinoleic acid YNB Glucose 1.1 0.3 -0.0   -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.5 0.4   -0.1
growth on oleic acid YNB Oleic Acid 1.5 0.4 -0.5   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 2.3 0.8 0.5   -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 2.2 0.7 0.9   -0.4
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