Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812673 to 814209 15438 mRNA_7071: 15439 - BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF..., at 814580 to 815327 15439 mRNA_7072: 15440 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 815614 to 818476 15440 mRNA_7073: 15441 - HMMPfam-Domain of unknown function DUF77-PF01910,SUPERFAMILY--SSF89957,TIGRFAM-TIGR00106 uncharacterized protein, MTH1187 family-TIGR00106, at 819072 to 820252 15441 mRNA_7074: 15442 - K02218 CSNK1, CKI casein kinase 1, at 821512 to 823166 15442
Group Condition mRNA_7070 mRNA_7071 mRNA_7072 mRNA_7073 mRNA_7074
15438
15439
15440
15441
15442
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.9 -0.6 -2.0  
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.4 -0.5 -0.1  
auxotrophy YNB Glucose 0.2 0.3 0.0 -0.8  
auxotrophy Dropout Complete 0.4 0.3 0.1 -0.9  
auxotrophy YNB Glucose 75mM Methionine 0.1 0.4 -0.4 -0.1  
growth on ypd YPD -0.2 -0.0 0.5 0.0  
growth on oleic acid YNB Glucose -0.1 0.6 0.3 -0.5  
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 -0.4 0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.8 -0.2 -0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.8 -0.0 -0.4  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.5 0.0 0.3  
auxotrophy YNB Glucose 75mM Arginine 0.2 0.1 0.2 0.2  
ypd buoyancy 40 hrs High Buoyancy 0.2 0.5 -0.2 0.3  
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.2 0.0 0.3  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 1.1 -0.4 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.4 0.1 0.6  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.2 0.5 0.4  
growth on oleic acid YNB Oleic Acid -0.0 1.5 0.4 -0.5  
growth on ricinoleic acid YNB Glucose 0.2 1.1 0.3 -0.0  
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 2.3 0.8 0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 2.2 0.7 0.9  
remove
mRNA_7070
plot
remove
mRNA_7071
plot
remove
mRNA_7072
remove
mRNA_7073
plot
remove
mRNA_7074
plot