Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7068: 15436 - K00167 BCKDHB, bkdA2 2-oxoisovalerate dehydrogenase E1 component beta subunit, at 804244 to 806337 15436 mRNA_7069: 15437 - HMMPfam-DNA-directed RNA polymerase III subunit Rpc31-PF11705, at 806497 to 812015 15437 mRNA_7070: 15438 - K13953 adhP alcohol dehydrogenase, propanol-preferring, at 812673 to 814209 15438 mRNA_7071: 15439 - BLAST histone H3 h3.1 [Schizosaccharomyces japonicus yF..., at 814580 to 815327 15439 mRNA_7072: 15440 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 815614 to 818476 15440
Group Condition mRNA_7068 mRNA_7069 mRNA_7070 mRNA_7071 mRNA_7072
15436
15437
15438
15439
15440
growth on ypd YPD -0.4 -0.1 -0.2 -0.0 0.5
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 0.1 0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.3 0.4 -0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.0 0.1 0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 0.1 -0.0 0.8 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.2 0.5 0.0
auxotrophy Dropout Complete -0.1 -0.0 0.4 0.3 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.0 0.2 0.4 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3 -0.1 0.3 0.2 0.0
growth on oleic acid YNB Glucose 0.0 -0.0 -0.1 0.6 0.3
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1 0.2 0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.0 0.1 1.1 -0.4
auxotrophy YNB Glucose 0.3 0.1 0.2 0.3 0.0
ypd buoyancy 40 hrs High Buoyancy 0.4 0.1 0.2 0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.2 0.2 0.2 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.0 0.2 0.8 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 -0.2 0.6 0.9 -0.6
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.0 1.5 0.4
growth on ricinoleic acid YNB Glucose 0.3 -0.1 0.2 1.1 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.1 0.1 2.2 0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -0.1 -0.0 2.3 0.8
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