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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7050: 15418 - K08678 UXS1, uxs UDP-glucuronate decarboxylase, at 761052 to 762821
15418
mRNA_7051: 15419 - HMMPfam-Translation initiation factor eIF3 subunit-PF08597, at 763063 to 764121
15419
mRNA_7052: 15420 - K01624 FBA, fbaA fructose-bisphosphate aldolase, class II, at 764515 to 766298
15420
mRNA_7053: 15421 - K01192 E3.2.1.25, MANBA, manB beta-mannosidase, at 766585 to 770373
15421
mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770607 to 773938
15422
Group
Condition
mRNA_7050
mRNA_7051
mRNA_7052
mRNA_7053
mRNA_7054
15418
15419
15420
15421
15422
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.3
growth on oleic acid
YNB Oleic Acid
-0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.4
growth on oleic acid
YNB Glucose
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.3
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.2
auxotrophy
Dropout Complete
0.2
0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.2
auxotrophy
YNB Glucose
0.2
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.8
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
0.2
growth on ypd
YPD
0.6
0.5
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