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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7047: 15415 - K07466 RFA1, RPA1, rpa replication factor A1, at 752253 to 754600
15415
mRNA_7048: 15416 - KOG2476 Uncharacterized conserved protein, at 754979 to 757509
15416
mRNA_7049: 15417 - KOG0565 Inositol polyphosphate 5-phosphatase and related proteins, at 758628 to 760981
15417
mRNA_7050: 15418 - K08678 UXS1, uxs UDP-glucuronate decarboxylase, at 761052 to 762821
15418
mRNA_7051: 15419 - HMMPfam-Translation initiation factor eIF3 subunit-PF08597, at 763063 to 764121
15419
Group
Condition
mRNA_7047
mRNA_7048
mRNA_7049
mRNA_7050
mRNA_7051
15415
15416
15417
15418
15419
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.0
-0.1
auxotrophy
Dropout Complete
0.2
-0.6
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.7
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
0.1
-0.1
-0.0
growth on oleic acid
YNB Glucose
0.0
0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
0.3
auxotrophy
YNB Glucose
0.5
-0.6
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.4
0.2
growth on ricinoleic acid
YNB Glucose
0.4
-0.6
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
-0.3
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.5
0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
-0.3
0.6
ypd buoyancy
40 hrs High Buoyancy
0.1
0.4
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.2
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.3
0.4
0.3
growth on ypd
YPD
0.3
0.6
0.6
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