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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7034: 15402 - HMMPfam-UBA/TS-N domain-PF00627,HMMPfam-Uncharacterized conserved protein (DUF2196)-PF09962,ProSiteProfiles-Ubiquitin-associated domain (UBA) profile.-PS50030,SUPERFAMILY--SSF46934, at 717485 to 718005
15402
mRNA_7035: 15403 - K11826 AP2M1 AP-2 complex subunit mu-1, at 718322 to 720163
15403
mRNA_7036: 15404 - K00831 serC, PSAT1 phosphoserine aminotransferase, at 721038 to 722425
15404
mRNA_7037: 15405 - K08254 E3.2.1.59 glucan endo-1,3-alpha-glucosidase, at 722546 to 724803
15405
mRNA_7038: 15406 - K15458 SAP185_190 SIT4-associating protein SAP185/190, at 725352 to 729605
15406
Group
Condition
mRNA_7034
mRNA_7035
mRNA_7036
mRNA_7037
mRNA_7038
15402
15403
15404
15405
15406
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
-0.5
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.1
-1.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
-0.3
-0.5
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.6
-0.3
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.1
-0.5
auxotrophy
Dropout Complete
0.0
-0.0
-0.3
auxotrophy
YNB Glucose
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
-0.2
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.3
0.3
growth on oleic acid
YNB Oleic Acid
0.6
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.1
-0.0
growth on oleic acid
YNB Glucose
0.6
0.0
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.5
-0.1
0.3
growth on ypd
YPD
0.9
0.5
-0.4
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