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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7032: 15400 - Hypothetical Protein, at 714493 to 715089
15400
mRNA_7033: 15401 - Hypothetical Protein, at 715593 to 716570
15401
mRNA_7034: 15402 - HMMPfam-UBA/TS-N domain-PF00627,HMMPfam-Uncharacterized conserved protein (DUF2196)-PF09962,ProSiteProfiles-Ubiquitin-associated domain (UBA) profile.-PS50030,SUPERFAMILY--SSF46934, at 717485 to 718005
15402
mRNA_7035: 15403 - K11826 AP2M1 AP-2 complex subunit mu-1, at 718322 to 720163
15403
mRNA_7036: 15404 - K00831 serC, PSAT1 phosphoserine aminotransferase, at 721038 to 722425
15404
Group
Condition
mRNA_7032
mRNA_7033
mRNA_7034
mRNA_7035
mRNA_7036
15400
15401
15402
15403
15404
ypd buoyancy
40 hrs No Buoyancy Separation
-1.4
-1.2
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.3
-0.2
auxotrophy
YNB Glucose
0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.1
0.1
growth on ricinoleic acid
YNB Glucose
0.3
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
-0.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-0.2
0.3
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.3
0.4
auxotrophy
Dropout Complete
0.3
-0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.6
-0.6
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.1
0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.6
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.7
-0.4
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
-0.2
-0.0
growth on oleic acid
YNB Glucose
0.4
-0.5
0.6
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.3
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.4
-0.1
growth on ypd
YPD
0.3
-0.2
0.9
growth on oleic acid
YNB Oleic Acid
0.3
0.1
0.6
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