Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7018: 15386 - Hypothetical Protein, at 684817 to 685871 15386 mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686088 to 688034 15387 mRNA_7020: 15388 - K11446 KDM5, JARID1 histone demethylase JARID1, at 688229 to 691595 15388 mRNA_7021: 15389 - K21027 TRMU, SLM3 tRNA-5-taurinomethyluridine 2-sulfurtransferase, at 692794 to 694459 15389 mRNA_7022: 15390 - KOG0758 Mitochondrial carnitine-acylcarnitine carrier protein, at 694742 to 696268 15390
Group Condition mRNA_7018 mRNA_7019 mRNA_7020 mRNA_7021 mRNA_7022
15386
15387
15388
15389
15390
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.8 -1.9 0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.4 -0.9 -0.4 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.1 0.4 -1.3 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.0 -1.0 0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.1 -0.9 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.2 -0.8 0.7 -0.2
growth on oleic acid YNB Oleic Acid 0.3 0.1 0.2 -0.9 -0.2
growth on ricinoleic acid YNB Glucose -0.0 0.5 -0.3 -0.3 -0.2
auxotrophy YNB Glucose 0.2 0.4 -0.6 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 1.2 0.2 -1.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.3 -0.2 0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.3 -0.0 0.2 -0.0
auxotrophy Dropout Complete -0.2 0.3 -0.2 0.1 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5 0.9 0.1 -1.2 -0.4
growth on ypd YPD 0.1 -0.2 -0.3 0.3 0.0
growth on oleic acid YNB Glucose 0.3 0.4 -0.5 0.1 0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 0.9 -0.5 -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2 -0.1 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.2 0.2 -0.2 0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.9 -0.8 0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.5 -0.2 0.2
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