Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678211 to 680397 15383 mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526 15384 mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683640 to 684233 15385 mRNA_7018: 15386 - Hypothetical Protein, at 684817 to 685871 15386 mRNA_7019: 15387 - K13212 LUC7L2 RNA-binding protein Luc7-like 2, at 686088 to 688034 15387
Group Condition mRNA_7015 mRNA_7016 mRNA_7017 mRNA_7018 mRNA_7019
15383
15384
15385
15386
15387
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.4 -2.4 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 -1.6 -0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.3 -1.0 0.2 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.2 -0.5 -0.5 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 -0.5 -0.3 0.2
growth on ypd YPD 0.3 0.2 -0.9 0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 -0.0 -0.2 0.2 -0.8
growth on ricinoleic acid YNB Glucose 0.0 0.1 -0.6 -0.0 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.1 -0.6 0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.1 0.0 0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1 -0.1 0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.1 -0.1 0.2 -0.1
growth on oleic acid YNB Oleic Acid 0.2 0.1 -0.1 0.3 0.1
auxotrophy Dropout Complete 0.3 0.1 0.5 -0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.2 -0.5 0.5 0.9
ypd buoyancy 40 hrs High Buoyancy 0.4 0.1 0.5 0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.0 -0.0 1.2
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.0 0.3 0.1 0.9
growth on oleic acid YNB Glucose 0.3 0.1 0.6 0.3 0.4
auxotrophy YNB Glucose 75mM Arginine 0.3 0.2 0.1 0.2 0.9
auxotrophy YNB Glucose 0.2 0.3 0.8 0.2 0.4
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