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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7013: 15381 - K10755 RFC2_4 replication factor C subunit 2/4, at 672641 to 674296
15381
mRNA_7014: 15382 - KOG1721 FOG Zn-finger, at 676400 to 676740
15382
mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678211 to 680397
15383
mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526
15384
mRNA_7017: 15385 - K03574 mutT, NUDT15, MTH2 8-oxo-dGTP diphosphatase, at 683640 to 684233
15385
Group
Condition
mRNA_7013
mRNA_7014
mRNA_7015
mRNA_7016
mRNA_7017
15381
15382
15383
15384
15385
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
-1.6
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.4
-2.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.3
-1.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.2
-0.5
growth on ricinoleic acid
YNB Glucose
0.0
0.1
-0.6
growth on ypd
YPD
0.3
0.2
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
0.2
-0.5
ypd buoyancy
40 hrs Low Buoyancy
0.3
0.1
-0.6
growth on oleic acid
YNB Oleic Acid
0.2
0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
-0.0
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.4
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.1
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.0
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.2
0.1
auxotrophy
Dropout Complete
0.3
0.1
0.5
ypd buoyancy
40 hrs High Buoyancy
0.4
0.1
0.5
growth on oleic acid
YNB Glucose
0.3
0.1
0.6
auxotrophy
YNB Glucose
0.2
0.3
0.8
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