Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7012: 15380 - KOG4364 Chromatin assembly factor-I, at 668588 to 672215 15380 mRNA_7013: 15381 - K10755 RFC2_4 replication factor C subunit 2/4, at 672641 to 674296 15381 mRNA_7014: 15382 - KOG1721 FOG Zn-finger, at 676400 to 676740 15382 mRNA_7015: 15383 - KOG2913 Predicted membrane protein, at 678211 to 680397 15383 mRNA_7016: 15384 - K01142 E3.1.11.2, xthA exodeoxyribonuclease III, at 680551 to 683526 15384
Group Condition mRNA_7012 mRNA_7013 mRNA_7014 mRNA_7015 mRNA_7016
15380
15381
15382
15383
15384
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation       -0.4 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy       -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy       -0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy       -0.2 -0.2
growth on ricinoleic acid YNB Glucose       0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid       -0.0 0.2
growth on ricinoleic acid YNB Ricinoleic Acid       0.1 0.1
growth on oleic acid YNB Oleic Acid       0.2 0.1
auxotrophy YNB Glucose 75mM Methionine       0.3 -0.0
facs on lipid accumulation Sorted No BODIPY Gate       0.2 0.1
auxotrophy Dropout Complete       0.3 0.1
facs on lipid accumulation Sorted High BODIPY Gate       0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy       0.3 0.1
growth on oleic acid YNB Glucose       0.3 0.1
ypd buoyancy 40 hrs High Buoyancy       0.4 0.1
growth on ypd YPD       0.3 0.2
ypd buoyancy 40 hrs No Buoyancy Separation       0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy       0.4 0.1
auxotrophy YNB Glucose 75mM Arginine       0.3 0.2
auxotrophy YNB Glucose       0.2 0.3
facs on lipid accumulation Sorted Low BODIPY Gate       0.6 -0.0
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