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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7004: 15372 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,ProSitePatterns-Glycosyl hydrolases family 5 signature.-PS00659,SUPERFAMILY--SSF51445, at 650077 to 652863
15372
mRNA_7005: 15373 - SUPERFAMILY--SSF81383, at 653075 to 653981
15373
mRNA_7006: 15374 - K17974 JSN1, PUF1 protein JSN1, at 654250 to 659147
15374
mRNA_7007: 15375 - BLAST mitochondrial complex I protein Fmp36 [Aschersonia al..., at 659889 to 660691
15375
mRNA_7008: 15376 - Hypothetical Protein, at 661061 to 661645
15376
Group
Condition
mRNA_7004
mRNA_7005
mRNA_7006
mRNA_7007
mRNA_7008
15372
15373
15374
15375
15376
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.3
-0.2
-1.9
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.4
-0.4
-2.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-2.1
0.2
0.2
-0.2
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.7
0.3
-0.7
-0.5
growth on ricinoleic acid
YNB Glucose
0.2
0.1
-0.4
-0.8
-0.2
growth on oleic acid
YNB Oleic Acid
-0.7
-0.0
-0.2
-0.4
0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.2
-0.1
-0.2
-0.3
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-1.3
0.3
0.1
-0.4
0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.4
-0.3
-0.1
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.1
-0.3
0.4
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.6
-0.3
-0.1
0.1
0.3
auxotrophy
YNB Glucose
-0.4
-0.1
-0.1
-0.3
0.4
growth on ypd
YPD
-0.1
-0.2
-0.3
0.7
-0.6
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.3
-0.0
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
-0.6
0.2
0.3
growth on oleic acid
YNB Glucose
-0.4
0.0
-0.3
-0.1
0.4
auxotrophy
Dropout Complete
-0.2
-0.5
-0.3
0.4
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.2
-0.1
0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-0.0
0.2
-0.0
0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
-0.1
-0.4
0.2
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
-0.0
0.2
-0.3
0.2
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