Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6998: 15366 - K00288 MTHFD methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase, at 632241 to 635924 15366 mRNA_6999: 15367 - HMMPfam-CUE domain-PF02845,ProSiteProfiles-CUE domain profile.-PS51140,SMART-Domain that may be involved in binding ubiquitin-conjugating enzymes (UBCs)-SM00546,SUPERFAMILY--SSF46934, at 636264 to 637761 15367 mRNA_7000: 15368 - K06653 PHO81 CDK inhibitor PHO81, at 638366 to 642076 15368 mRNA_7001: 15369 - KOG0566 Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family, at 642201 to 644311 15369 mRNA_7002: 15370 - Hypothetical Protein, at 644510 to 646069 15370
Group Condition mRNA_6998 mRNA_6999 mRNA_7000 mRNA_7001 mRNA_7002
15366
15367
15368
15369
15370
growth on ricinoleic acid YNB Ricinoleic Acid -1.3 0.2 0.3 -0.3 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.6 -0.4 0.2 -0.1
growth on ricinoleic acid YNB Glucose -1.3 0.4 0.3 -0.3 -0.1
growth on oleic acid YNB Glucose -1.4 0.0 0.5 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.1 -0.6 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 0.2 -0.2 -0.4 0.3
auxotrophy YNB Glucose 75mM Methionine -1.4 0.4 0.5 0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1 0.2 -0.6 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 0.5 0.1 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.2 0.2 -0.2
auxotrophy Dropout Complete -0.6 0.3 0.7 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.1 0.5 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.7 0.1 0.4 0.1 0.1
auxotrophy YNB Glucose 75mM Arginine -1.1 0.5 0.6 -0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 0.1 0.2 0.0 0.2
growth on ypd YPD -0.1 -0.1 0.2 0.0 0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.2 0.6 -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.4 0.0 -0.1
auxotrophy YNB Glucose -1.3 0.7 0.8 0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.0 0.5 -0.1 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.6 0.6 -0.1 0.2
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