Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6991: 15359 - KOG0254 Predicted transporter (major facilitator superfamily), at 617991 to 620077 15359 mRNA_6992: 15360 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 620430 to 622573 15360 mRNA_6993: 15361 - HMMPfam-Protein of unknown function (DUF455)-PF04305,ProSiteProfiles-Rieske [2Fe-2S] iron-sulfur domain profile.-PS51296,SUPERFAMILY--SSF47240,SUPERFAMILY--SSF50022, at 622654 to 624401 15361 mRNA_6994: 15362 - K10134 EI24 etoposide-induced 2.4 mRNA, at 624528 to 626391 15362 mRNA_6995: 15363 - K15323 TSEN34 tRNA-splicing endonuclease subunit Sen34, at 626622 to 627882 15363
Group Condition mRNA_6991 mRNA_6992 mRNA_6993 mRNA_6994 mRNA_6995
15359
15360
15361
15362
15363
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -0.1 0.2 -0.3  
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.5 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.2 -0.3 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.6 -0.3 0.2 0.1  
auxotrophy Dropout Complete -0.0 0.1 -0.8 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.3 -0.6 0.4  
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1 -0.1 -0.6  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.0 -0.5 0.1  
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 0.0 -0.5  
auxotrophy YNB Glucose 75mM Methionine 0.4 0.1 -0.8 0.0  
growth on ypd YPD 0.0 0.2 -0.3 -0.1  
growth on oleic acid YNB Glucose 0.1 -0.3 -0.1 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.1 -0.4 0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.1 -0.2 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 -0.2 -0.3 0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.2 -0.5 0.6  
growth on ricinoleic acid YNB Glucose 0.3 0.0 -0.2 0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 -0.1 0.0  
auxotrophy YNB Glucose 75mM Arginine 0.6 0.4 -0.6 0.2  
auxotrophy YNB Glucose 0.7 0.2 -0.5 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 0.0 -0.2 0.6  
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