Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6987: 15355 - BLAST plasma membrane protein [Pseudozyma hubeiensis SY62], at 606395 to 609554 15355 mRNA_6988: 15356 - K00485 FMO dimethylaniline monooxygenase (N-oxide forming), at 609889 to 611754 15356 mRNA_6989: 15357 - K11836 USP5_13, UBP14 ubiquitin carboxyl-terminal hydrolase 5/13, at 611825 to 615054 15357 mRNA_6990: 15358 - K09001 anmK anhydro-N-acetylmuramic acid kinase, at 615563 to 617347 15358 mRNA_6991: 15359 - KOG0254 Predicted transporter (major facilitator superfamily), at 617991 to 620077 15359
Group Condition mRNA_6987 mRNA_6988 mRNA_6989 mRNA_6990 mRNA_6991
15355
15356
15357
15358
15359
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -2.5 -0.3 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1 -3.2 0.2 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.1 -2.8 -1.2 0.4
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.6 -1.9 -0.5 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.2 -2.4 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.7 -1.1 0.1 -0.0
growth on oleic acid YNB Oleic Acid -0.2 -0.7 -0.6 0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.0 -1.2 -0.7 -0.0
growth on oleic acid YNB Glucose -0.3 -0.1 -0.2 -0.2 0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.5 -0.8 0.2 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.5 0.1 -0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1 -1.2 0.8 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.4 0.6 -0.2 0.1
growth on ypd YPD -0.1 0.5 -0.3 0.1 0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.1 0.0 0.3 0.4
auxotrophy Dropout Complete -0.4 0.3 -0.2 0.7 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.2 1.0 -0.5 0.1
auxotrophy YNB Glucose -0.1 0.1 -0.1 0.6 0.7
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 0.1 0.5 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 0.1 0.6 0.1 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.1 1.9 0.8 0.1
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