Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6971: 15339 - K03671 trxA thioredoxin 1, at 567242 to 568041 15339 mRNA_6972: 15340 - K20279 SYNJ synaptojanin, at 568176 to 572419 15340 mRNA_6973: 15341 - K11303 HAT1, KAT1 histone acetyltransferase 1, at 572592 to 574305 15341 mRNA_6974: 15342 - K17686 copA, ATP7 Cu+-exporting ATPase, at 574442 to 577802 15342 mRNA_6975: 15343 - Hypothetical Protein, at 578459 to 580488 15343
Group Condition mRNA_6971 mRNA_6972 mRNA_6973 mRNA_6974 mRNA_6975
15339
15340
15341
15342
15343
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.0 -0.4   -1.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -0.2 -0.5   -1.8
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.4 0.1   -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.5 0.1   -1.2
growth on ypd YPD -0.4 -0.2 -0.5   0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.7   0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 0.0   -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.4 -0.3   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 0.1   0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.0 -0.1   -0.5
growth on oleic acid YNB Glucose -0.4 -0.2 -0.5   0.9
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 0.6   -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.3 -0.4   0.4
growth on ricinoleic acid YNB Glucose 0.1 -0.1 -0.4   0.7
auxotrophy YNB Glucose 75mM Methionine -0.3 0.1 -0.1   0.9
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 0.9   -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 0.1 0.3   0.8
auxotrophy Dropout Complete 0.0 0.2 0.3   0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.0 -0.4   1.6
ypd buoyancy 40 hrs High Buoyancy 0.6 -0.0 0.1   0.7
auxotrophy YNB Glucose 0.0 0.1 0.3   1.3
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