Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6967: 15335 - K19995 SCAMP secretory carrier-associated membrane protein, at 558352 to 560106 15335 mRNA_6968: 15336 - K00737 MGAT3 beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, at 560422 to 561850 15336 mRNA_6969: 15337 - K17261 CAP1_2, SRV2 adenylyl cyclase-associated protein, at 561995 to 564059 15337 mRNA_6970: 15338 - Hypothetical Protein, at 566123 to 566867 15338 mRNA_6971: 15339 - K03671 trxA thioredoxin 1, at 567242 to 568041 15339
Group Condition mRNA_6967 mRNA_6968 mRNA_6969 mRNA_6970 mRNA_6971
15335
15336
15337
15338
15339
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.2   -0.3 -0.2
growth on oleic acid YNB Glucose -0.5 -0.2   -0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 -0.5   0.6 -0.9
growth on oleic acid YNB Oleic Acid -0.1 -0.1   -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.4   0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4   0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 0.1   -0.5 0.6
auxotrophy YNB Glucose 75mM Methionine -0.6 -0.1   0.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.1   -0.3 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.3   0.2 -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.1   0.1 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.1   0.1 0.2
auxotrophy Dropout Complete -0.1 -0.5   0.5 0.0
auxotrophy YNB Glucose -0.1 -0.2   0.3 0.0
growth on ypd YPD -0.5 0.7   0.2 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.3   0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.3   0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.7 -0.1   -0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.5 -0.2   0.2 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.3   0.7 0.2
ypd buoyancy 40 hrs High Buoyancy 0.7 0.1   0.1 0.6
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