Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_6964: 15332 - K18754 LIN28 protein lin-28, at 551090 to 553316 15332 mRNA_6965: 15333 - Hypothetical Protein, at 553877 to 555010 15333 mRNA_6966: 15334 - K02210 MCM7, CDC47 DNA replication licensing factor MCM7, at 555370 to 558100 15334 mRNA_6967: 15335 - K19995 SCAMP secretory carrier-associated membrane protein, at 558352 to 560106 15335 mRNA_6968: 15336 - K00737 MGAT3 beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, at 560422 to 561850 15336
Group Condition mRNA_6964 mRNA_6965 mRNA_6966 mRNA_6967 mRNA_6968
15332
15333
15334
15335
15336
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.6   0.0 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.3   -0.5 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.1   -0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.5   -0.2 -0.4
growth on oleic acid YNB Glucose 0.1 -0.2   -0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.3   0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.0   -0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.3 0.1   -0.3 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.3   0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 0.3   -0.6 -0.1
growth on oleic acid YNB Oleic Acid 0.1 -0.3   -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.2   -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.1   0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.2   -0.0 0.1
auxotrophy Dropout Complete 0.1 0.6   -0.1 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.4   0.0 -0.3
auxotrophy YNB Glucose 0.1 0.5   -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1   0.5 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.0   0.7 -0.1
growth on ypd YPD 0.1 0.6   -0.5 0.7
ypd buoyancy 40 hrs High Buoyancy -0.0 0.2   0.7 0.1
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